STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH69968.1Putative cytochrome biogenesis related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (257 aa)    
Predicted Functional Partners:
CCH69970.1
Putative cytochrome C assembly protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.976
CCH69969.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.974
CCH69967.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.963
CCH69966.1
Putative phosphoglycerate mutase (gpmB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.860
CCH70254.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
  
 0.833
CCH69971.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
CCH69601.1
Putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.505
hemE
Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
  
  
 0.461
CCH70871.1
Integral membrane protein.
   
    0.453
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
     
 0.443
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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