STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70038.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (257 aa)    
Predicted Functional Partners:
CCH69985.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.587
CCH70726.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.540
CCH71414.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.506
CCH71471.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.504
CCH70747.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.474
CCH69978.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.463
mshB
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.
  
     0.449
CCH68668.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.448
CCH71251.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
  
  0.447
CCH69620.1
Putative transcriptional regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.425
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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