STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70111.1Putative Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (543 aa)    
Predicted Functional Partners:
CCH68868.1
Putative Proline dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.984
gltA-2
Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.818
CCH69679.1
Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  0.771
gabT
4-aminobutyrate aminotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.750
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.726
fadH
2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.703
CCH69310.1
Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.693
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.693
fumA
Fumarate hydratase (fumarase A), aerobic Class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.692
CCH69915.1
Putative ferredoxin oxidoreductase (Putative pyruvate synthase (porA)) and gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
   
 0.686
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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