Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH69060.1 | CCH70121.1 | BN10_130074 | BN10_520022 | Putative ArsR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Acetyltransferase. | 0.482 |
CCH69060.1 | CCH70974.1 | BN10_130074 | BN10_730005 | Putative ArsR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Peptidase M6, immune inhibitor A. | 0.545 |
CCH69679.1 | CCH69944.1 | BN10_300020 | BN10_460045 | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Carbamoyl-phosphate synthase L chain ATP-binding protein. | 0.686 |
CCH69679.1 | CCH70121.1 | BN10_300020 | BN10_520022 | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Acetyltransferase. | 0.668 |
CCH69679.1 | CCH70737.1 | BN10_300020 | BN10_650034 | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.738 |
CCH69679.1 | gltA-2 | BN10_300020 | BN10_860017 | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.626 |
CCH69944.1 | CCH69679.1 | BN10_460045 | BN10_300020 | Carbamoyl-phosphate synthase L chain ATP-binding protein. | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.686 |
CCH69944.1 | CCH70121.1 | BN10_460045 | BN10_520022 | Carbamoyl-phosphate synthase L chain ATP-binding protein. | Acetyltransferase. | 0.531 |
CCH69944.1 | gltA-2 | BN10_460045 | BN10_860017 | Carbamoyl-phosphate synthase L chain ATP-binding protein. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.914 |
CCH69944.1 | pta | BN10_460045 | BN10_560038 | Carbamoyl-phosphate synthase L chain ATP-binding protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.935 |
CCH70121.1 | CCH69060.1 | BN10_520022 | BN10_130074 | Acetyltransferase. | Putative ArsR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.482 |
CCH70121.1 | CCH69679.1 | BN10_520022 | BN10_300020 | Acetyltransferase. | Putative Ornithine aminotransferase (rocD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.668 |
CCH70121.1 | CCH69944.1 | BN10_520022 | BN10_460045 | Acetyltransferase. | Carbamoyl-phosphate synthase L chain ATP-binding protein. | 0.531 |
CCH70121.1 | CCH70282.1 | BN10_520022 | BN10_540061 | Acetyltransferase. | Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function. | 0.515 |
CCH70121.1 | CCH70737.1 | BN10_520022 | BN10_650034 | Acetyltransferase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.723 |
CCH70121.1 | CCH70974.1 | BN10_520022 | BN10_730005 | Acetyltransferase. | Peptidase M6, immune inhibitor A. | 0.528 |
CCH70121.1 | CCH71068.1 | BN10_520022 | BN10_780005 | Acetyltransferase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.577 |
CCH70121.1 | gltA-2 | BN10_520022 | BN10_860017 | Acetyltransferase. | Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme. | 0.671 |
CCH70121.1 | pta | BN10_520022 | BN10_560038 | Acetyltransferase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.743 |
CCH70121.1 | secA | BN10_520022 | BN10_520021 | Acetyltransferase. | Translocase binding subunit (ATPase); Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.633 |
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