Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH70122.1 | CCH70125.1 | BN10_520023 | BN10_520026 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Phosphoribosyltransferase. | 0.627 |
CCH70122.1 | CCH70126.1 | BN10_520023 | BN10_520027 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Lipoprotein. | 0.588 |
CCH70122.1 | hpf | BN10_520023 | BN10_520025 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Conserved hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.830 |
CCH70122.1 | hsdS | BN10_520023 | BN10_300089 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Type I restriction modification enzyme protein S. | 0.449 |
CCH70122.1 | mtrA | BN10_520023 | BN10_520029 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | DNA-binding response regulator mtrA. | 0.501 |
CCH70122.1 | mtrB | BN10_520023 | BN10_520028 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Sensor histidine kinase mtrB. | 0.540 |
CCH70122.1 | yfiK | BN10_520023 | BN10_520024 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Uncharacterized transcriptional regulatory protein yfiK. | 0.773 |
CCH70125.1 | CCH70122.1 | BN10_520026 | BN10_520023 | Phosphoribosyltransferase. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.627 |
CCH70125.1 | CCH70126.1 | BN10_520026 | BN10_520027 | Phosphoribosyltransferase. | Lipoprotein. | 0.801 |
CCH70125.1 | hpf | BN10_520026 | BN10_520025 | Phosphoribosyltransferase. | Conserved hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.662 |
CCH70125.1 | mtrA | BN10_520026 | BN10_520029 | Phosphoribosyltransferase. | DNA-binding response regulator mtrA. | 0.745 |
CCH70125.1 | mtrB | BN10_520026 | BN10_520028 | Phosphoribosyltransferase. | Sensor histidine kinase mtrB. | 0.804 |
CCH70125.1 | yfiK | BN10_520026 | BN10_520024 | Phosphoribosyltransferase. | Uncharacterized transcriptional regulatory protein yfiK. | 0.527 |
CCH70126.1 | CCH70122.1 | BN10_520027 | BN10_520023 | Lipoprotein. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.588 |
CCH70126.1 | CCH70125.1 | BN10_520027 | BN10_520026 | Lipoprotein. | Phosphoribosyltransferase. | 0.801 |
CCH70126.1 | hpf | BN10_520027 | BN10_520025 | Lipoprotein. | Conserved hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | 0.637 |
CCH70126.1 | mtrA | BN10_520027 | BN10_520029 | Lipoprotein. | DNA-binding response regulator mtrA. | 0.813 |
CCH70126.1 | mtrB | BN10_520027 | BN10_520028 | Lipoprotein. | Sensor histidine kinase mtrB. | 0.857 |
CCH70126.1 | yfiK | BN10_520027 | BN10_520024 | Lipoprotein. | Uncharacterized transcriptional regulatory protein yfiK. | 0.501 |
hpf | CCH70122.1 | BN10_520025 | BN10_520023 | Conserved hypothetical protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.830 |
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