STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70157.1Glycosyl transferase group 1. (371 aa)    
Predicted Functional Partners:
CCH70156.1
Glycosyl transferase.
    0.912
CCH68834.1
Glycoside hydrolase, family 13-like.
   
 0.752
treZ
Malto-oligosyltrehalose trehalohydrolase.
   
 0.743
scoB
Fragment of succinyl CoA:3-oxoacid CoA-transferase (subunit A) (part 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
    0.728
pgm
Phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
  0.699
pep1B
Putative glucanohydrolase pep1B; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
    
 0.698
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.682
CCH70991.1
Hypothetical protein; No homology to any previously reported sequences.
 
 0.673
CCH68644.1
Putative Glycogen synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
 
0.654
CCH70430.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.613
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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