STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70160.1Glycosyl transferase group 1. (366 aa)    
Predicted Functional Partners:
wbbL
dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol,alpha-3-L-rhamnosyltransferase.
 
    0.853
CCH70161.1
Glycosyl transferase family 2 (fragment).
 
    0.841
CCH70158.1
ABC transporter related protein (fragment).
 
   0.778
CCH70159.1
ABC-2 type transporter.
 
    0.767
CCH70162.1
Glycosyl transferase group 1.
 
    
0.756
CCH68834.1
Glycoside hydrolase, family 13-like.
   
 0.752
treZ
Malto-oligosyltrehalose trehalohydrolase.
   
 0.743
CCH70156.1
Glycosyl transferase.
 
    0.728
CCH68644.1
Putative Glycogen synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.
  
  
  0.709
CCH70991.1
Hypothetical protein; No homology to any previously reported sequences.
 
 
 0.709
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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