STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70166.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (404 aa)    
Predicted Functional Partners:
fadE
Putative acyl-CoA dehydrogenase fadE25; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.772
CCH69683.1
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.768
cofD
LPPG:FO 2-phospho-L-lactate transferase.
 
   
 0.729
CCH70143.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.724
CCH70734.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.723
ugd
UDP-glucose 6-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
    
  0.629
CCH69557.1
Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.621
CCH68985.1
Hypothetical protein; No homology to any previously reported sequences.
  
     0.573
CCH69039.1
NADPH-dependent FMN reductase.
  
 0.559
CCH68525.1
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
   0.547
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.