STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70251.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (223 aa)    
Predicted Functional Partners:
CCH70252.1
Putative conserved integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.953
CCH69113.1
Zn-dependent alcohol dehydrogenase.
  
 
 0.632
czcD
Cobalt-zinc-cadmium resistance protein CzcD.
       0.601
CCH69295.1
Predicted membrane protein (fragment).
 
  
 0.599
CCH70250.1
Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.595
CCH70248.1
Transcriptional regulator, ArsR family protein.
       0.574
CCH69967.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.458
CCH70254.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.458
CCH69239.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.401
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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