STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70294.1Putative hydrolase transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (457 aa)    
Predicted Functional Partners:
CCH70296.1
Putative RNA polymerase sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.769
CCH70295.1
Methylated-DNA/protein- cysteinemethyltransferase.
       0.768
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
     
 0.619
CCH70297.1
Putative regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.552
CCH70736.1
5'-nucleotidase/2',3'-cyclic phosphodiesterase or related esterase; Belongs to the 5'-nucleotidase family.
    
  0.551
CCH70298.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.513
CCH70299.1
Glycosyltransferase involved in cell wall biogenesis.
       0.513
CCH70300.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
       0.500
CCH71078.1
Putative B-hexosaminidase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.433
CCH69278.1
Abortive infection protein (fragment).
  
     0.406
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.