STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70423.1Exopolysaccharide biosynthesis protein. (332 aa)    
Predicted Functional Partners:
CCH70422.1
Glycosyl transferase.
     0.994
CCH70424.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.883
CCH70425.1
VTC domain protein.
 
     0.862
CCH70426.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.859
CCH70421.1
Putative Ser/Thr protein phosphatase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.697
blaI
Transcriptional regulator BlaI.
     
 0.474
CCH68501.1
Multidrug resistance protein.
  
     0.445
iniA
Isoniazid-inductible protein iniA.
  
     0.415
CCH68518.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.403
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
Server load: low (24%) [HD]