STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70440.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (281 aa)    
Predicted Functional Partners:
CCH68767.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
 
 0.995
CCH70439.1
4,5-DOPA dioxygenase extradiol-like protein.
       0.741
CCH71130.1
Putative UDP-N-acetylglucosamine transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.659
CCH69567.1
Transcriptional regulator, XRE family.
  
 
 0.657
CCH69405.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.578
CCH69740.1
Transcriptional regulator, XRE family.
  
 
 0.578
CCH70790.1
Helix-turn-helix motif protein (fragment).
  
 
 0.578
CCH71220.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.578
CCH71310.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 
 0.578
CCH70437.1
Putative Acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.509
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.