STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70451.1Putative ATP-dependent RNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (775 aa)    
Predicted Functional Partners:
CCH70452.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
       0.656
rsbV
Anti-sigma-B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
       0.644
ylqC
Putative RNA binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0109 family.
  
   
 0.536
hppA
K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.
       0.498
CCH70040.1
Putative Jag-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      
 0.463
CCH70448.1
Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the methyltransferase superfamily.
       0.436
CCH68564.1
Putative ATP-dependent DNA helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.401
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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