STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70517.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (194 aa)    
Predicted Functional Partners:
int
Phage integrase; Belongs to the 'phage' integrase family.
 
     0.940
CCH70516.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.909
CCH70515.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.873
CCH70512.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.822
CCH70518.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.776
CCH70506.1
Putative conjugal transfer protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.774
CCH69744.1
DNA primase catalytic core, N-terminal domain (fragment).
  
     0.595
CCH70514.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.511
CCH69239.1
Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.450
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.