STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70584.1Transcriptional regulator, HxlR family. (330 aa)    
Predicted Functional Partners:
CCH70585.1
Dioxygenase.
 
     0.949
CCH70586.1
Putative Acetyl-CoA acetyltransferase (phaA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
 
     0.883
CCH70583.1
AMP-dependent synthetase and ligase.
 
     0.844
yedI
Inner membrane protein yedI.
  
    0.731
CCH71167.1
Transcriptional regulator, HxlR family.
  
     0.702
CCH68790.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.540
fadA
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
 
     0.527
CCH70828.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
    0.524
CCH70582.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.472
CCH70641.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
    0.435
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.