STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpBFe(3+)-transport system permease protein sfuB. (514 aa)    
Predicted Functional Partners:
fbpA
Fe(3+)-binding periplasmic protein.
 
 
 0.998
fbpC
Fe(3+) ions import ATP-binding protein FbpC 2; Belongs to the ABC transporter superfamily.
 
 0.988
CCH70613.1
AMP-dependent synthetase and ligase.
 
     0.922
CCH70898.1
ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 0.846
potG
Putrescine transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.844
ugpC-2
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
  0.742
ugpC
Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.
  
  0.729
CCH69195.1
AMP-dependent synthetase and ligase.
  
     0.673
CCH71229.1
Putative polyamine ABC-transporter integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
  0.585
CCH70895.1
DNA binding domain, excisionase family.
    
  0.471
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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