STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70683.1Hypothetical protein; No homology to any previously reported sequences. (111 aa)    
Predicted Functional Partners:
liaR-2
Two-component response regulator (YvqE) responding to cell wall stress; Function of homologous gene experimentally demonstrated in an other organism; regulator.
 
   0.893
CCH69219.1
Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.771
CCH71326.1
Membrane hypothetical protein; No homology to any previously reported sequences.
  
     0.760
CCH70687.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.745
CCH69424.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.732
CCH71325.1
Response regulator receiver protein.
  
   0.634
CCH70686.1
Two component transcriptional regulator, LuxR family.
  
   0.626
CCH71245.1
Putative two-component system sensor kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.625
degU
Transcriptional regulatory protein degU.
  
   0.622
CCH69110.1
Putative respose regulatory protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
   0.586
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.