STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoHPhosphate starvation-induced protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype. (351 aa)    
Predicted Functional Partners:
ybeY
Putative metalloprotease Bcav_1751; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
  
 0.995
era
GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
  
 0.905
recO
DNA repair protein recO; Involved in DNA repair and RecF pathway recombination.
  
    0.851
CCH70852.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
  
    0.835
CCH70849.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.771
CCH70854.1
Exported hypothetical protein; No homology to any previously reported sequences.
       0.746
CCH70855.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.746
yqeL
Putative ribosomal maturation protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
 
     0.581
cmk
Cytidylate kinase.
 
    0.547
CCH70848.1
Putative RNA polymerase ECF-subfamily sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.511
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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