STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70877.1Uncharacterized LmbE-like protein. (444 aa)    
Predicted Functional Partners:
CCH70875.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
     0.984
CCH70876.1
Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.982
CCH70991.1
Hypothetical protein; No homology to any previously reported sequences.
  
 
 0.775
CCH68774.1
FAD dependent oxidoreductase; Belongs to the GcvT family.
  
 
  0.767
CCH70602.1
Putative dehydrogenase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GcvT family.
  
 
  0.767
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.744
CCH70700.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.613
CCH68525.1
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.601
CCH69917.1
Putative non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.600
CCH70148.1
Glycosyl transferase.
  
 
 0.583
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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