STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70937.1Formate dehydrogenase, alpha subunit. (943 aa)    
Predicted Functional Partners:
CCH70935.1
Formate dehydrogenase, gamma subunit.
 
 0.999
CCH70936.1
Formate dehydrogenase, beta subunit.
 0.999
CCH70938.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.998
CCH70677.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
 0.997
nuoF
NADH:ubiquinone oxidoreductase, chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
 
 0.993
CCH69737.1
Putative ferredoxin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.985
mnhD
Na(+)/H(+) antiporter subunit D (mrpD); Function of homologous gene experimentally demonstrated in an other organism; transporter.
  
 0.969
gltB
Glutamate synthase (small subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 0.941
gltA-2
Glutamate synthase (large subunit); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
     
 0.934
CCH69915.1
Putative ferredoxin oxidoreductase (Putative pyruvate synthase (porA)) and gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.901
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.