STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH70958.1ABC transporter, ATP-binding/permease protein. (592 aa)    
Predicted Functional Partners:
CCH70955.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.854
CCH68703.1
Stage V sporulation protein K (modular protein).
   
 0.796
CCH70957.1
Putative galactosyltransferase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
   0.765
dnaK
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
   0.760
CCH70954.1
Polysaccharide deacetylase family protein.
 
     0.738
CCH69862.1
Fused cysteine transporter subunits of ABC superfamily: membrane component; ATP-binding component (fragment).
 
 
 
0.737
CCH70952.1
Lipopolysaccharide biosynthesis protein.
  
   0.706
CCH71090.1
ABC transporter, ATP-binding protein.
 
  
0.642
CCH68522.1
Putative Heat shock protein 70; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the heat shock protein 70 family.
  
   0.630
CCH70956.1
Protein-tyrosine kinase.
 
     0.624
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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