Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH69565.1 | CCH71065.1 | BN10_230008 | BN10_780002 | Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Cyanate permease. | 0.419 |
CCH70982.1 | CCH71065.1 | BN10_730013 | BN10_780002 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0246 family. | Cyanate permease. | 0.863 |
CCH71065.1 | CCH69565.1 | BN10_780002 | BN10_230008 | Cyanate permease. | Putative transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.419 |
CCH71065.1 | CCH70982.1 | BN10_780002 | BN10_730013 | Cyanate permease. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0246 family. | 0.863 |
CCH71065.1 | CCH71067.1 | BN10_780002 | BN10_780004 | Cyanate permease. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.414 |
CCH71065.1 | CCH71258.1 | BN10_780002 | BN10_860005 | Cyanate permease. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.690 |
CCH71065.1 | guaB | BN10_780002 | BN10_780001 | Cyanate permease. | Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.556 |
CCH71065.1 | whiB-5 | BN10_780002 | BN10_780003 | Cyanate permease. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.540 |
CCH71067.1 | CCH71065.1 | BN10_780004 | BN10_780002 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Cyanate permease. | 0.414 |
CCH71067.1 | whiB-5 | BN10_780004 | BN10_780003 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.576 |
CCH71258.1 | CCH71065.1 | BN10_860005 | BN10_780002 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Cyanate permease. | 0.690 |
guaB | CCH71065.1 | BN10_780001 | BN10_780002 | Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Cyanate permease. | 0.556 |
guaB | whiB-5 | BN10_780001 | BN10_780003 | Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.533 |
whiB-5 | CCH71065.1 | BN10_780003 | BN10_780002 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Cyanate permease. | 0.540 |
whiB-5 | CCH71067.1 | BN10_780003 | BN10_780004 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.576 |
whiB-5 | guaB | BN10_780003 | BN10_780001 | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | Inosine-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.533 |