STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH71133.1Hypothetical protein; No homology to any previously reported sequences. (32 aa)    
Predicted Functional Partners:
CCH71134.1
Putative ribonuclease D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.773
CCH71135.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CCH71131.1
Fused enoyl-CoA hydratase and epimerase and isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
       0.578
CCH71132.1
Putative acetyl-CoA C-acyltransferase (Beta-ketothiolase) or Acetoacetyl-CoA thiolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the thiolase-like superfamily. Thiolase family.
       0.578
CCH71136.1
Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.555
hemE
Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
       0.555
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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