Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCH69558.1 | CCH69559.1 | BN10_230001 | BN10_230002 | Hypothetical protein; No homology to any previously reported sequences. | SNF2-like (fragment). | 0.827 |
CCH69558.1 | CCH70351.1 | BN10_230001 | BN10_560044 | Hypothetical protein; No homology to any previously reported sequences. | 5'-3' exonuclease. | 0.942 |
CCH69558.1 | CCH71198.1 | BN10_230001 | BN10_820034 | Hypothetical protein; No homology to any previously reported sequences. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.755 |
CCH69558.1 | dinG | BN10_230001 | BN10_680051 | Hypothetical protein; No homology to any previously reported sequences. | Putative ATP-dependent helicase dinG homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.918 |
CCH69558.1 | polA | BN10_230001 | BN10_1630003 | Hypothetical protein; No homology to any previously reported sequences. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.972 |
CCH69558.1 | rpoA | BN10_230001 | BN10_130086 | Hypothetical protein; No homology to any previously reported sequences. | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
CCH69558.1 | rpoB | BN10_230001 | BN10_760041 | Hypothetical protein; No homology to any previously reported sequences. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
CCH69558.1 | rpoC | BN10_230001 | BN10_760040 | Hypothetical protein; No homology to any previously reported sequences. | RNA polymerase (beta' subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
CCH69558.1 | rpoZ | BN10_230001 | BN10_980005 | Hypothetical protein; No homology to any previously reported sequences. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.996 |
CCH69559.1 | CCH69558.1 | BN10_230002 | BN10_230001 | SNF2-like (fragment). | Hypothetical protein; No homology to any previously reported sequences. | 0.827 |
CCH69559.1 | CCH70351.1 | BN10_230002 | BN10_560044 | SNF2-like (fragment). | 5'-3' exonuclease. | 0.941 |
CCH69559.1 | CCH71198.1 | BN10_230002 | BN10_820034 | SNF2-like (fragment). | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.724 |
CCH69559.1 | dinG | BN10_230002 | BN10_680051 | SNF2-like (fragment). | Putative ATP-dependent helicase dinG homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.934 |
CCH69559.1 | polA | BN10_230002 | BN10_1630003 | SNF2-like (fragment). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.958 |
CCH69559.1 | rpoA | BN10_230002 | BN10_130086 | SNF2-like (fragment). | RNA polymerase (alpha subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
CCH69559.1 | rpoB | BN10_230002 | BN10_760041 | SNF2-like (fragment). | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
CCH69559.1 | rpoC | BN10_230002 | BN10_760040 | SNF2-like (fragment). | RNA polymerase (beta' subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.983 |
CCH69559.1 | rpoZ | BN10_230002 | BN10_980005 | SNF2-like (fragment). | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.996 |
CCH70351.1 | CCH69558.1 | BN10_560044 | BN10_230001 | 5'-3' exonuclease. | Hypothetical protein; No homology to any previously reported sequences. | 0.942 |
CCH70351.1 | CCH69559.1 | BN10_560044 | BN10_230002 | 5'-3' exonuclease. | SNF2-like (fragment). | 0.941 |
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