STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH71359.1Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (319 aa)    
Predicted Functional Partners:
CCH71360.1
2-isopropylmalate synthase (fragment); Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
  0.843
acpA
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.797
CCH71358.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.773
CCH71357.1
Acyltransferase; Belongs to the long-chain O-acyltransferase family.
 
     0.733
CCH71361.1
Alcohol dehydrogenase zinc-binding domain protein (fragment).
    
  0.716
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.677
tdh
Threonine 3-dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
   
 
 0.656
CCH69879.1
Putative Acetyl-coenzyme A carboxylase carboxyl transferase subunits beta/alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
  0.647
scoB
Fragment of succinyl CoA:3-oxoacid CoA-transferase (subunit A) (part 2); Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 
 0.637
CCH68670.1
S-(hydroxymethyl)mycothiol dehydrogenase.
   
  0.635
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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