STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH71551.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (99 aa)    
Predicted Functional Partners:
CCH71553.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.939
CCH71555.1
Conserved membrane hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.877
CCH71554.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
     0.844
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.830
CCH71546.1
Putative DNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
     0.786
rbpA-2
Conserved hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.775
hemH
Putative ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
       0.775
CCH70486.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.771
whiA
Sporulation transcription regulator whiA; Involved in cell division and chromosome segregation.
  
     0.764
BN10_20008
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.759
Your Current Organism:
Tetrasphaera elongata
NCBI taxonomy Id: 1193181
Other names: T. elongata Lp2, Tetrasphaera elongata DSM 14184, Tetrasphaera elongata Lp2, Tetrasphaera elongata str. Lp2, Tetrasphaera elongata strain Lp2, actinomycete Lp2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.