STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCJ06515.1Uncharacterised protein. (158 aa)    
Predicted Functional Partners:
spoIIIAE
Stage III sporulation protein AE precursor.
       0.779
SCJ06554.1
Stage III sporulation protein AG.
       0.779
SCJ06424.1
Stage III sporulation protein AC.
       0.743
SCJ06456.1
Stage III sporulation protein AD.
       0.741
SCJ06366.1
Uncharacterized protein conserved in bacteria.
       0.708
SCJ06396.1
Stage III sporulation protein SpoAB.
       0.708
spoIIIAH
Stage III sporulation protein AH.
       0.662
SCJ06614.1
Protein of uncharacterised function (DUF322).
       0.499
Your Current Organism:
uncultured Butyricicoccus sp.
NCBI taxonomy Id: 1193532
Other names: u. Butyricicoccus sp.
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