STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCJ84070.1Transcriptional repressor DicA. (350 aa)    
Predicted Functional Partners:
SCJ26364.1
Uncharacterized protein conserved in bacteria.
   
 
 0.603
hrb
Nitric oxide reductase NADH:FprA oxidoreductase.
  
     0.545
SCJ16887.1
Putative DNA-binding transcriptional regulator.
  
   0.506
SCJ84078.1
Bifunctional xylanase/deacetylase precursor.
       0.505
SCJ84063.1
TraB family.
  
    0.458
ygaD
Competence damage-inducible protein A.
    
 0.426
Your Current Organism:
uncultured Flavonifractor sp.
NCBI taxonomy Id: 1193534
Other names: u. Flavonifractor sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.