STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLR90288.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
OLR89886.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.945
OLR90289.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.809
OLR89885.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.801
OLR89768.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.688
OLR94897.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.684
OLR95345.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.644
OLR89884.1
Serine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.634
OLR90077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.622
BJP25_12415
Ribonuclease HI; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.622
OLR94766.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.622
Your Current Organism:
Actinokineospora bangkokensis
NCBI taxonomy Id: 1193682
Other names: A. bangkokensis, Actinokineospora bangkokensis Intra et al. 2013, Actinokineospora sp. 44EHW, BCC 53155, DSM 46700, NBRC 108932, strain 44EHW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.