STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHR53_05440Unannotated protein. (127 aa)    
Predicted Functional Partners:
CHR53_05560
Unannotated protein.
 
  
 0.652
CHR53_13135
Unannotated protein.
 
  
 0.644
CHR53_15155
Unannotated protein.
  
     0.635
CHR53_11175
Unannotated protein.
 
     0.558
CHR53_05445
Unannotated protein.
       0.506
CHR53_04045
Unannotated protein.
  
     0.491
CHR53_05345
Unannotated protein.
  
     0.491
CHR53_26630
Unannotated protein.
  
     0.478
CHR53_06055
Unannotated protein.
  
     0.475
CHR53_27550
Unannotated protein.
  
     0.465
Your Current Organism:
Bacillus mesonae
NCBI taxonomy Id: 1193713
Other names: B. mesonae, Bacillus mesonae Liu et al. 2014, Bacillus sp. FJAT-13985, CGMCC1.12238, DSM 25968, strain FJAT-13985
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.