STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1OE_164Aminotransferase class-V family protein. (366 aa)    
Predicted Functional Partners:
A1OE_1007
Ferredoxin.
  
 0.964
A1OE_1423
Rhodanese-like domain protein.
   
 0.934
A1OE_1499
ptzA.
    
 
 0.816
A1OE_163
Hypothetical protein.
       0.773
A1OE_1154
Iron-sulfur cluster assembly accessory family protein; Belongs to the HesB/IscA family.
 
  
 0.753
trmU
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.703
A1OE_256
nifU-like domain protein.
 
 
 0.678
A1OE_544
Hypothetical protein.
  
 
 0.590
acpP
Acylcarrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.589
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
  
 0.573
Your Current Organism:
Endolissoclinum faulkneri L2
NCBI taxonomy Id: 1193729
Other names: C. Endolissoclinum faulkneri L2, Candidatus Endolissoclinum faulkneri L2, Thalassobaculum sp. L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.