STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1OE_406PQQ enzyme repeat family protein. (446 aa)    
Predicted Functional Partners:
yaeT
Outer membrane assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.999
yfiO
Outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
 
 
 0.953
der
Small GTP-binding domain protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.953
A1OE_852
smpA / OmlA family protein.
  
 
 
 0.892
A1OE_907
PPIC-type PPIASE domain protein.
  
 
 0.859
A1OE_407
Hypothetical protein.
       0.832
A1OE_478
Hypothetical protein.
  
    0.716
lptD
Organic solvent tolerance family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
   
 0.607
A1OE_49
Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
   
 0.577
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
      
 0.550
Your Current Organism:
Endolissoclinum faulkneri L2
NCBI taxonomy Id: 1193729
Other names: C. Endolissoclinum faulkneri L2, Candidatus Endolissoclinum faulkneri L2, Thalassobaculum sp. L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.