STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1OE_850Major Facilitator Superfamily protein. (369 aa)    
Predicted Functional Partners:
A1OE_561
ptzF.
  
  
 0.591
guaA
GMP synthase, N-terminal domain protein; Catalyzes the synthesis of GMP from XMP.
     
 0.575
polA
DNA polymerase I family protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.572
A1OE_849
Hypothetical protein.
       0.572
A1OE_1499
ptzA.
     
 0.555
A1OE_1497
ptzB; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.524
A1OE_177
Glycosyl transferase 2 family protein.
  
 
 
 0.463
A1OE_1235
Hypothetical protein.
  
    0.402
etfDH
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.402
Your Current Organism:
Endolissoclinum faulkneri L2
NCBI taxonomy Id: 1193729
Other names: C. Endolissoclinum faulkneri L2, Candidatus Endolissoclinum faulkneri L2, Thalassobaculum sp. L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.