STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A1OE_888ABC transporter family protein; Belongs to the ABC transporter superfamily. (353 aa)    
Predicted Functional Partners:
A1OE_886
Binding--dependent transport system inner membrane component family protein.
 
 0.999
A1OE_887
Binding--dependent transport system inner membrane component family protein.
 0.999
A1OE_885
Putative ABC transporter-binding protein; Similar to DR_1438.
  
 0.993
A1OE_306
Binding--dependent transport system inner membrane component family protein.
 
    
 0.802
A1OE_889
Hypothetical protein.
       0.442
Your Current Organism:
Endolissoclinum faulkneri L2
NCBI taxonomy Id: 1193729
Other names: C. Endolissoclinum faulkneri L2, Candidatus Endolissoclinum faulkneri L2, Thalassobaculum sp. L2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.