STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCH78739.1Putative sporulation protein K-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (622 aa)    
Predicted Functional Partners:
prcB
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.
  
 0.942
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
   
 0.933
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
  0.932
acuC
Acetoin utilization protein acuC.
 
 
 0.927
BN12_30014
Putative Predicted transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
 0.894
dnaN
DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]
  
 
 0.885
CCH77604.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 0.853
yahD
Putative protein with ankyrin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
    
 0.853
CCH76940.1
AAA ATPase central domain protein.
  
  0.852
dnaK
Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.845
Your Current Organism:
Tetrasphaera japonica
NCBI taxonomy Id: 1194083
Other names: T. japonica T1-X7, Tetrasphaera japonica T1-X7, Tetrasphaera japonica str. T1-X7, Tetrasphaera japonica strain T1-X7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.