STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE34043.1Glycosyl transferase family 2. (287 aa)    
Predicted Functional Partners:
SHE33991.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
  0.811
SHE34091.1
Glycosyltransferase Family 4.
  
    0.774
SHE34140.1
EpsG family protein.
       0.773
SHE33946.1
Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.746
SHE34189.1
Hypothetical protein.
       0.718
SHE34235.1
Poly-gamma-glutamate synthesis protein (capsule biosynthesis protein).
       0.718
SHE34282.1
RimK-like ATP-grasp domain-containing protein.
       0.718
SHE33791.1
Glucose-1-phosphate cytidylyltransferase.
  
 
  0.482
SHE33840.1
N-acetylglucosaminyl deacetylase, LmbE family.
       0.444
SHE33900.1
Sulfotransferase domain-containing protein.
       0.444
Your Current Organism:
Aliifodinibius roseus
NCBI taxonomy Id: 1194090
Other names: A. roseus, ACCC 10715, Aliifodinibius roseus Wang et al. 2013, Bacteroidetes bacterium YIM D15, DSM 21986, KCTC 23442, YIM D15
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.