STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF80182.1Protein SCO1/2. (202 aa)    
Predicted Functional Partners:
SHE94166.1
Cytochrome c.
 
 0.913
SHF80142.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.912
SHF80101.1
Nitrite reductase (NO-forming).
 
     0.872
SHG19462.1
Cytochrome c oxidase subunit 2.
 
 
 0.847
SHF80223.1
Plastocyanin.
       0.773
SHF79983.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein.
 
   
 0.773
SHF80017.1
Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain.
 
     0.692
SHE94452.1
Cytochrome c oxidase subunit 3.
 
  
 0.559
SHE93943.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
  
  
  0.555
SHG07186.1
Cytochrome c2.
 
  
  0.551
Your Current Organism:
Aliifodinibius roseus
NCBI taxonomy Id: 1194090
Other names: A. roseus, ACCC 10715, Aliifodinibius roseus Wang et al. 2013, Bacteroidetes bacterium YIM D15, DSM 21986, KCTC 23442, YIM D15
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.