STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG39692.1Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). (515 aa)    
Predicted Functional Partners:
SHF12137.1
Copper resistance protein B.
 
  
 0.755
SHF97982.1
Copper resistance protein B.
 
  
 0.755
SHF07644.1
Serpin B; Belongs to the serpin family.
    
  0.676
SHF82221.1
Serpin B; Belongs to the serpin family.
    
  0.676
SHG39657.1
Uncharacterized membrane protein.
 
     0.672
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.664
SHF85371.1
Azurin.
  
 
 0.643
SHE94166.1
Cytochrome c.
     
 0.638
SHG39625.1
SnoaL-like domain-containing protein.
       0.608
SHG33686.1
PAS domain S-box-containing protein.
   
 
  0.607
Your Current Organism:
Aliifodinibius roseus
NCBI taxonomy Id: 1194090
Other names: A. roseus, ACCC 10715, Aliifodinibius roseus Wang et al. 2013, Bacteroidetes bacterium YIM D15, DSM 21986, KCTC 23442, YIM D15
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.