STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5A7TRA4Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
A0A5A7V5F1
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.557
A0A5A7VDQ8
Methylcrotonoyl-CoA carboxylase subunit alpha.
    
 0.557
A0A5A7U5C7
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.542
A0A5A7SSQ6
DNA-directed RNA polymerases II, IV and V subunit 6A.
    
 0.527
A0A5A7U4T8
Transcription elongation factor SPT4-like protein 2.
    
 0.508
A0A5A7TNG5
DNA-directed RNA polymerases II and V subunit 8A-like; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
    
  0.502
A0A5D3CZU6
DNA-directed RNA polymerases II and V subunit 8A-like.
    
  0.502
A0A5A7U3Z0
DNA-directed RNA polymerases II, IV and V subunit 11.
    
  0.440
A0A5A7UV57
DNA-directed RNA polymerases II, IV and V subunit 11-like.
    
  0.440
A0A5A7U664
DNA-directed RNA polymerases II, IV and V subunit 3-like.
    
  0.433
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 1194695
Other names: C. melo var. makuwa, Cucumis melo subsp. agrestis var. makuwa, Cucumis melo var. makuwa
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