STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5D3BDG7Protein SSUH2-like protein. (141 aa)    
Predicted Functional Partners:
A0A5A7TQA4
Protein SSUH2-like protein.
 
     0.911
A0A5A7TVU3
Uncharacterized protein.
  
     0.514
A0A5A7UDX8
RNA-binding protein 8A.
  
     0.505
A0A5A7UVF5
Protein disulfide-isomerase LQY1.
      
 0.457
A0A5D3DDJ2
Glutamate 5-kinase isoform X1.
  
     0.451
A0A5A7VB73
Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein isoform 1.
  
     0.442
A0A5D3C2E7
Protein EMBRYO SAC DEVELOPMENT ARREST 3.
      
 0.439
A0A5D3D0A8
Armadillo repeat-containing protein LFR.
  
     0.435
A0A5A7SYF0
Uncharacterized protein.
  
     0.433
A0A5A7VBS3
DNA ligase.
  
     0.425
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 1194695
Other names: C. melo var. makuwa, Cucumis melo subsp. agrestis var. makuwa, Cucumis melo var. makuwa
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