STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5D3DAN1PLASMODESMATA CALLOSE-BINDING PROTEIN 4-like. (185 aa)    
Predicted Functional Partners:
A0A5A7V3S1
Splicing factor 3B subunit 1.
   
 
 0.802
A0A5A7TNA0
Small nuclear ribonucleoprotein Sm D2.
   
 
 0.787
A0A5A7VM47
Putative small nuclear ribonucleoprotein F.
   
 
 0.779
A0A5D3DMX8
U2 small nuclear ribonucleoprotein A.
   
 
 0.773
A0A5D3BFS6
Putative ribose-5-phosphate isomerase 3 chloroplastic.
   
 
 0.771
A0A5D3BCB3
Pre-mRNA branch site p14-like protein.
   
 
 0.765
A0A5D3C6A2
Small nuclear ribonucleoprotein G.
   
   0.760
A0A5A7U270
Splicing factor 3B subunit 2.
   
 
 0.757
A0A5A7TEU0
Splicing factor 1 isoform X1.
   
 
 0.704
A0A5A7TSW0
Branchpoint-bridging protein.
   
 
 0.704
Your Current Organism:
Cucumis melo
NCBI taxonomy Id: 1194695
Other names: C. melo var. makuwa, Cucumis melo subsp. agrestis var. makuwa, Cucumis melo var. makuwa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.