STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGRI_07120Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase. (921 aa)    
Predicted Functional Partners:
AGRI_00175
COG0835 Chemotaxis signal transduction protein.
  
 0.999
AGRI_01070
Putative sensor histidine kinase with a response regulator receiver domain; COG2202 FOG: PAS/PAC domain.
 0.999
AGRI_01095
COG3300 MHYT domain (predicted integral membrane sensor domain).
 
0.999
AGRI_03814
Sensory box histidine kinase/response regulator; COG0591 Na+/proline symporter.
  
0.999
AGRI_06347
Multi-sensor hybrid histidine kinase.
 0.999
AGRI_06387
COG0835 Chemotaxis signal transduction protein.
  
 0.999
AGRI_07455
Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase.
 
0.999
AGRI_07640
COG0642 Signal transduction histidine kinase.
 
0.999
AGRI_07885
Multi-sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
 
0.999
AGRI_08390
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
 
 0.999
Your Current Organism:
Alishewanella agri
NCBI taxonomy Id: 1195246
Other names: A. agri BL06, Alishewanella agri BL06, Alishewanella sp. BL06
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.