STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH38517.1Glycosyltransferase involved in cell wall bisynthesis. (369 aa)    
Predicted Functional Partners:
SHH38493.1
Hypothetical protein.
 
     0.943
SHH38476.1
Hypothetical protein.
 
     0.885
SHH47002.1
Hypothetical protein.
  
     0.766
SHH47020.1
Hypothetical protein.
  
     0.703
SHH38536.1
Mechanosensitive ion channel.
       0.601
SHH82382.1
Hypothetical protein.
  
     0.522
SHH81264.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.521
SHH65008.1
Peptidase family C25.
  
     0.496
SHH46978.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.490
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.485
Your Current Organism:
Wenyingzhuangia marina
NCBI taxonomy Id: 1195760
Other names: CGMCC 1.12162, DSM 100572, JCM 18494, Lutibacter sp. D1, W. marina, Wenyingzhuangia marina Liu et al. 2014, strain D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.