STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH39246.1Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. (289 aa)    
Predicted Functional Partners:
SHH39268.1
DinB superfamily protein.
       0.718
SHH54216.1
O-Glycosyl hydrolase; Belongs to the glycosyl hydrolase 30 family.
  
  
 0.646
SHH65008.1
Peptidase family C25.
  
  
 0.646
SHH39222.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.507
SHH39290.1
ATP-binding cassette, subfamily F, uup.
  
    0.505
SHH39181.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
       0.418
SHH39200.1
Protein of unknown function.
       0.418
Your Current Organism:
Wenyingzhuangia marina
NCBI taxonomy Id: 1195760
Other names: CGMCC 1.12162, DSM 100572, JCM 18494, Lutibacter sp. D1, W. marina, Wenyingzhuangia marina Liu et al. 2014, strain D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.