STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH64992.1Hypothetical protein. (367 aa)    
Predicted Functional Partners:
SHH43756.1
Protein involved in gliding motility SprA.
  
 
 0.999
SHH65008.1
Peptidase family C25.
 
   
 0.949
SHH48615.1
Protein of unknown function.
  
   
 0.796
SHH65029.1
Protein involved in gliding motility GldJ.
 
     0.793
SHH72087.1
Protein of unknown function.
  
     0.773
SHH69079.1
Response regulator receiver domain-containing protein.
  
     0.770
SHH44320.1
Periplasmic chaperone for outer membrane proteins Skp.
  
    0.767
SHH34552.1
Probable protein-translocating porin PorT.
  
   
 0.764
SHH39875.1
Protein involved in gliding motility SprE; Manually curated.
  
   
 0.760
SHH40500.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Wenyingzhuangia marina
NCBI taxonomy Id: 1195760
Other names: CGMCC 1.12162, DSM 100572, JCM 18494, Lutibacter sp. D1, W. marina, Wenyingzhuangia marina Liu et al. 2014, strain D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.