STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH73588.1Outer membrane receptor proteins, mostly Fe transport; Manually curated. (788 aa)    
Predicted Functional Partners:
SHH73569.1
Protein of unknown function.
 
     0.945
SHH73552.1
Hypothetical protein.
 
     0.646
SHH40180.1
AsmA family protein.
  
     0.625
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.620
SHH73503.1
Hypothetical protein.
       0.596
SHH73536.1
Penicillin-binding protein 1C.
       0.596
SHH93765.1
Outer membrane transport energization protein TonB.
  
   0.562
SHH62069.1
Phosphoribosylformylglycinamidine cyclo-ligase.
  
     0.543
SHH71746.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
      0.533
SHH81230.1
Membrane protein YfhO.
  
     0.503
Your Current Organism:
Wenyingzhuangia marina
NCBI taxonomy Id: 1195760
Other names: CGMCC 1.12162, DSM 100572, JCM 18494, Lutibacter sp. D1, W. marina, Wenyingzhuangia marina Liu et al. 2014, strain D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.