STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH74328.1Cytochrome c oxidase accessory protein FixG. (473 aa)    
Predicted Functional Partners:
SHH74280.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.985
SHH74312.1
Cytochrome c oxidase cbb3-type subunit 3.
  
 0.979
SHH74367.1
Hypothetical protein.
 
     0.947
SHH74352.1
FixH protein.
 
  
 0.916
SHH74260.1
Cytochrome oxidase maturation protein, cbb3-type.
 
  
 0.910
SHH74293.1
Hypothetical protein.
 
  
 0.872
SHH74232.1
Cu+-exporting ATPase.
 
  
 0.803
SHH30997.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
  
 0.769
SHH74598.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.767
SHH75650.1
4Fe-4S dicluster domain-containing protein.
 
 
 0.561
Your Current Organism:
Wenyingzhuangia marina
NCBI taxonomy Id: 1195760
Other names: CGMCC 1.12162, DSM 100572, JCM 18494, Lutibacter sp. D1, W. marina, Wenyingzhuangia marina Liu et al. 2014, strain D1
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