Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH45405.1 | SHH79992.1 | SAMN05444281_0680 | SAMN05444281_2040 | PD-(D/E)XK nuclease superfamily protein. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.437 |
| SHH46654.1 | SHH72845.1 | SAMN05444281_0734 | SAMN05444281_1689 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.662 |
| SHH46654.1 | SHH79992.1 | SAMN05444281_0734 | SAMN05444281_2040 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.463 |
| SHH46654.1 | rpoA | SAMN05444281_0734 | SAMN05444281_2480 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.978 |
| SHH46654.1 | rpoB | SAMN05444281_0734 | SAMN05444281_2006 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.971 |
| SHH46654.1 | rpoC | SAMN05444281_0734 | SAMN05444281_2007 | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.969 |
| SHH59225.1 | SHH72845.1 | SAMN05444281_1095 | SAMN05444281_1689 | Glutamate synthase (NADH) large subunit. | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | 0.687 |
| SHH59225.1 | SHH79992.1 | SAMN05444281_1095 | SAMN05444281_2040 | Glutamate synthase (NADH) large subunit. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.818 |
| SHH59225.1 | rpoB | SAMN05444281_1095 | SAMN05444281_2006 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.521 |
| SHH59225.1 | rpoC | SAMN05444281_1095 | SAMN05444281_2007 | Glutamate synthase (NADH) large subunit. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.497 |
| SHH72845.1 | SHH46654.1 | SAMN05444281_1689 | SAMN05444281_0734 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.662 |
| SHH72845.1 | SHH59225.1 | SAMN05444281_1689 | SAMN05444281_1095 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Glutamate synthase (NADH) large subunit. | 0.687 |
| SHH72845.1 | SHH79978.1 | SAMN05444281_1689 | SAMN05444281_2039 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.691 |
| SHH72845.1 | SHH79992.1 | SAMN05444281_1689 | SAMN05444281_2040 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.509 |
| SHH72845.1 | rpoA | SAMN05444281_1689 | SAMN05444281_2480 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.518 |
| SHH72845.1 | rpoB | SAMN05444281_1689 | SAMN05444281_2006 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.507 |
| SHH72845.1 | rpoC | SAMN05444281_1689 | SAMN05444281_2007 | Monosaccharide ABC transporter substrate-binding protein, CUT2 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.488 |
| SHH79961.1 | SHH79978.1 | SAMN05444281_2038 | SAMN05444281_2039 | STE24 endopeptidase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.578 |
| SHH79961.1 | SHH79992.1 | SAMN05444281_2038 | SAMN05444281_2040 | STE24 endopeptidase. | Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. | 0.451 |
| SHH79961.1 | purA | SAMN05444281_2038 | SAMN05444281_2041 | STE24 endopeptidase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.427 |
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