STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A361_21130Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)    
Predicted Functional Partners:
A361_21135
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.914
A361_21140
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.863
A361_08130
Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.555
A361_21125
Sporulation protein YqfC; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.506
A361_21120
Stage IV sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.489
A361_21115
Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
A361_21145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
rpsU
30S ribosomal protein S21; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.
       0.448
A361_18645
Sporulation protein SpoOM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.426
Your Current Organism:
Bacillus oceanisediminis
NCBI taxonomy Id: 1196031
Other names: B. oceanisediminis 2691, Bacillus oceanisediminis 2691
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.