BHQ10_001809 protein (Talaromyces amestolkiae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

BHQ10_001809

HMG box domain-containing protein. (682 aa)

Predicted Functional Partners:

BHQ10_008767

0.700

BHQ10_001806

0.659

BHQ10_007822

0.596

BHQ10_009193

0.596

BHQ10_000613

0.591

BHQ10_004551

0.591

BHQ10_007068

0.591

BHQ10_000087

0.585

BHQ10_000029

0.513

BHQ10_001544

0.505

Your Current Organism:

Talaromyces amestolkiae

NCBI taxonomy Id: 1196081
Other names: CBS 132696, CBS H-21050, DTO 179F5, DTO179F5, Penicillium sp. CBS 263.93, Penicillium sp. CBS 274.95, Penicillium sp. GT11, T. amestolkiae, Talaromyces amestolkae, Talaromyces amestolkiae Yilmaz, Houbraken, Frisvad & Samson 2012, Talaromyces sp CMV-2012a

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BHQ10_000029	BHQ10_001809	A0A364KKE7	A0A364KQG8	Uncharacterized protein.	HMG box domain-containing protein.	0.513
BHQ10_000029	BHQ10_008767	A0A364KKE7	A0A364LAA8	Uncharacterized protein.	Uncharacterized protein.	0.540
BHQ10_000087	BHQ10_001809	A0A364KKK3	A0A364KQG8	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	HMG box domain-containing protein.	0.585
BHQ10_000613	BHQ10_001544	A0A364KM44	A0A364KPP9	Uncharacterized protein.	HMG box domain-containing protein.	0.666
BHQ10_000613	BHQ10_001809	A0A364KM44	A0A364KQG8	Uncharacterized protein.	HMG box domain-containing protein.	0.591
BHQ10_000613	BHQ10_004551	A0A364KM44	A0A364KYD0	Uncharacterized protein.	Uncharacterized protein.	0.865
BHQ10_000613	BHQ10_007068	A0A364KM44	A0A364L5I2	Uncharacterized protein.	Uridine kinase; Belongs to the uridine kinase family.	0.844
BHQ10_001544	BHQ10_000613	A0A364KPP9	A0A364KM44	HMG box domain-containing protein.	Uncharacterized protein.	0.666
BHQ10_001544	BHQ10_001806	A0A364KPP9	A0A364KQG0	HMG box domain-containing protein.	Uncharacterized protein.	0.645
BHQ10_001544	BHQ10_001809	A0A364KPP9	A0A364KQG8	HMG box domain-containing protein.	HMG box domain-containing protein.	0.505
BHQ10_001544	BHQ10_004551	A0A364KPP9	A0A364KYD0	HMG box domain-containing protein.	Uncharacterized protein.	0.666
BHQ10_001544	BHQ10_007068	A0A364KPP9	A0A364L5I2	HMG box domain-containing protein.	Uridine kinase; Belongs to the uridine kinase family.	0.666
BHQ10_001806	BHQ10_001544	A0A364KQG0	A0A364KPP9	Uncharacterized protein.	HMG box domain-containing protein.	0.645
BHQ10_001806	BHQ10_001809	A0A364KQG0	A0A364KQG8	Uncharacterized protein.	HMG box domain-containing protein.	0.659
BHQ10_001809	BHQ10_000029	A0A364KQG8	A0A364KKE7	HMG box domain-containing protein.	Uncharacterized protein.	0.513
BHQ10_001809	BHQ10_000087	A0A364KQG8	A0A364KKK3	HMG box domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.585
BHQ10_001809	BHQ10_000613	A0A364KQG8	A0A364KM44	HMG box domain-containing protein.	Uncharacterized protein.	0.591
BHQ10_001809	BHQ10_001544	A0A364KQG8	A0A364KPP9	HMG box domain-containing protein.	HMG box domain-containing protein.	0.505
BHQ10_001809	BHQ10_001806	A0A364KQG8	A0A364KQG0	HMG box domain-containing protein.	Uncharacterized protein.	0.659
BHQ10_001809	BHQ10_004551	A0A364KQG8	A0A364KYD0	HMG box domain-containing protein.	Uncharacterized protein.	0.591

page 1 of 2

Server load: low (24%) [HD]

Permalink

Network

Fusion

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Neighborhood

© STRING Consortium 2024

Credits

Access

Info

About